BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B12LP1|AL426649
(837 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig590 1363 0.0
3x_Contig1362 133 4e-31
>3x_Contig590
Length = 2287
Score = 1363 bits (685), Expect = 0.0
Identities = 696/701 (99%), Gaps = 1/701 (0%)
Strand = Plus / Minus
Query: 1 tgagtatgcctcttatgttacaaagaaagaaatgaaccgaatttgaaagttagaaaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tgagtatgcctcttatgttacaaagaaagaaatgaaccgaatttgaaagttagaaaggga 642
Query: 61 agaattgaagtttgactttttttgccgatttgattgagaactcatactttctcaacttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 agaattgaagtttgactttttttgccgatttgattgagaactcatactttctcaacttta 582
Query: 121 tcgcccatatattccaagtagtggcacccaaagacagamcagtgaaagttgacaamcgtg 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 581 tcgcccatatattccaagtagtggcacccaaagacagaccagtgaaagttgacaaccgtg 522
Query: 181 tataaatgacgataggagttttcgaattcttccatatcaatcgcagcgaggctctcctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tataaatgacgataggagttttcgaattcttccatatcaatcgcagcgaggctctcctta 462
Query: 241 atttccatctctttcttgcttgtagatgtcctgtttgcctctgaaggtgactggaaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atttccatctctttcttgcttgtagatgtcctgtttgcctctgaaggtgactggaaaata 402
Query: 301 gaagaaacacccgttgaatcatcatttgagattggtagggttgatgtcgcggtaccagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gaagaaacacccgttgaatcatcatttgagattggtagggttgatgtcgcggtaccagta 342
Query: 361 gcattggtagcagtattggtgtttccgcacatgttgataaagtcttgttttaccgtgcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gcattggtagcagtattggtgtttccgcacatgttgataaagtcttgttttaccgtgcca 282
Query: 421 tcctttgagcactctccgaatttgaacacgatttcttcaagagacttgaatacccttgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tcctttgagcactctccgaatttgaacacgatttcttcaagagacttgaatacccttgct 222
Query: 481 tcaagaacaccatagacatcgctcagtggttgagtttgtttggataaccacgaggtagcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tcaagaacaccatagacatcgctcagtggttgagtttgtttggataaccacgaggtagcg 162
Query: 541 aagtcgatcttcttatgatctagagataggttagcacttgatgaagatgacacctgagga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aagtcgatcttcttatgatctagagataggttagcacttgatgaagatgacacctgagga 102
Query: 601 gcgcca-saccggatgattgtgtgccatcagaatattgtcttaagtactcctctttcaat 659
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gcgccagcaccggatgattgtgtgccatcagaatattgtcttaagtactcctctttcaat 42
Query: 660 tgatcgataactttgttcaattgcactgcaatamtcagagt 700
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 41 tgatcgataactttgttcaattgcactgcaatactcagagt 1
>3x_Contig1362
Length = 8864
Score = 133 bits (67), Expect = 4e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 769 ttgttgtataattcttgatgataaattctttcattggtcttgtmaaatccgcgttgttag 828
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 374 ttgttgtataattcttgatgataaattctttcattggtcttgtcaaatccgcgttgttag 433
Query: 829 ccacaagtt 837
|||||||||
Sbjct: 434 ccacaagtt 442
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7183
Number of Sequences: 1807
Number of extensions: 7183
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 2
length of query: 837
length of database: 10,358,551
effective HSP length: 16
effective length of query: 821
effective length of database: 10,329,639
effective search space: 8480633619
effective search space used: 8480633619
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)